==================================================
file name: Daphnia_pulex-chromosome-jgi060905.fa 
sequences:          9080
total length:  227063090 bp  (166244437 bp excl N/X-r
GC level:         41.52 %
bases masked:    3277271 bp (  1.44 %)
==================================================
               number of      length   percentage
               elements*    occupied  of sequence
--------------------------------------------------
SINEs:              142         8919 bp     0.00 %
      ALUs            1           38 bp     0.00 %
      MIRs          141         8881 bp     0.00 %

LINEs:              888       141121 bp     0.06 %
      LINE1          67        13928 bp     0.01 %
      LINE2         310        91476 bp     0.04 %
      L3/CR1        409        28690 bp     0.01 %

LTR elements:        21         1355 bp     0.00 %
      MaLRs           1           55 bp     0.00 %
      ERVL            4          248 bp     0.00 %
      ERV_classI     14          936 bp     0.00 %
      ERV_classII     2          116 bp     0.00 %

DNA elements:        35         3350 bp     0.00 %
      MER1_type      25         1552 bp     0.00 %
      MER2_type       4          241 bp     0.00 %

Unclassified:         1           60 bp     0.00 %

Total interspersed repeats:   154805 bp     0.07 %


Small RNA:         6407       535530 bp     0.24 %

Satellites:          13          471 bp     0.00 %
Simple repeats:   24618       946976 bp     0.42 %
Low complexity:   42242      1639658 bp     0.72 %
==================================================

* most repeats fragmented by insertions or deletions
  have been counted as one element


The query species was assumed to be Homo
RepeatMasker version open-3.1.5 , default mode
run with cross_match version 0.990329
RepBase Update 20060314, RM database version 20060314