Tandem duplicate gene clusters are selected from those with homology
to other organisms. Descriptions here suggested from homology
may not be the most accurate.
Duplicate genes were located with 'tandy' duplicate finding software.
This is a work-in-progress: These automatically detected clusters
need human judgement still on value as a true gene cluster.
Don Gilbert, June 2007, gilbertd@indiana.edu
| Homolog Group | Histone H2A |
| N_dupl | 17 |
|
| Gene_ID | NCBI_GNO_1000063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_613075, NP_613258, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_106344 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | EAT45039, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_613075, NP_613258, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_262063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001017990, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_542451, NP_613075, NP_613258, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_376063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001017990, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_542451, NP_613075, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_388063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | AAP80715, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_613075, NP_613258, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_424063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001017990, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_505463, NP_524519, NP_542163, NP_542451, NP_613075, NP_613258, NP_619541, NP_724343, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_472063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001017990, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_542451, NP_613075, NP_613258, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_492063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001017990, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_542451, NP_613075, NP_613258, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_584063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001017990, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_542451, NP_613075, NP_613258, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_654063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001017990, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_542451, NP_613075, NP_613258, NP_619541, NP_724343, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_708063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001017990, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_542451, NP_613075, NP_613258, NP_619541, NP_724343, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_714063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001017990, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_542451, NP_613075, NP_613258, NP_619541, NP_724343, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_794063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_613075, NP_613258, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_814063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_613075, NP_613258, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_920063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_505463, NP_524519, NP_542163, NP_613075, NP_613258, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, P02268 |
|
| Gene_ID | NCBI_GNO_950063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001017990, NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_501718, NP_505463, NP_524519, NP_542163, NP_542451, NP_613075, NP_613258, NP_619541, NP_724343, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|
| Gene_ID | NCBI_GNO_982063 |
| Tandem regions | s6c142, s6c167, s6c18, s6c180, s6c214, s6c234, s6c248, s6c289, s6c305, s6c312, s6c43, s6c80, s6c98, s35c22 |
| Notes | H2A_SEPOF, P02268, Sepia officinalis, Histone H2A |
| Dbxref | NP_001027366, NP_002096, NP_002097, NP_003503, NP_003507, NP_003508, NP_004884, NP_009552, NP_010511, NP_014631, NP_034566, NP_036145, NP_036544, NP_061119, NP_066390, NP_066408, NP_066409, NP_066544, NP_080903, NP_254280, NP_492642, NP_500569, NP_505463, NP_524519, NP_542163, NP_613075, NP_613258, NP_619541, NP_724343, NP_734466, NP_778235, NP_783589, NP_783590, NP_783592, NP_808356, NP_808760, NP_835490, NP_835585, NP_958844, NP_958924, NP_996883, sp:P02268 |
|